These Blackberry Cheesecake Cupcakes are the perfect individual-sized treats, combining the creamy richness of cheesecake with a burst of fresh blackberry flavor. With a buttery graham cracker crust, a smooth cheesecake filling, and a swirl of blackberry sauce, these cupcakes are both beautiful and delicious. Perfect for parties, special occasions, or simply treating yourself, these little delights are a must-try for cheesecake lovers.
1. Introduction to Blackberry Cheesecake Cupcakes
Blackberry Cheesecake Cupcakes offer a balance of tangy blackberry, creamy cheesecake, and a slightly crunchy graham cracker crust. Easy to serve and just the right portion size, these cupcakes are a fun twist on traditional cheesecake, with a hint of berry flavor in every bite.
Why You’ll Love This Recipe
The combination of flavors and textures in these cupcakes—tart blackberries, creamy cheesecake, and a crunchy crust—make them a crowd-pleaser. Plus, they’re easy to customize and simple to make, delivering all the indulgence of cheesecake in a portable, bite-sized form.
2. Ingredients for Blackberry Cheesecake Cupcakes
Graham Cracker Crust
- 3/4 cup graham cracker crumbs (about 6 full sheets, crushed)
- 2 tbsp granulated sugar
- 3 tbsp unsalted butter, melted
Cheesecake Filling
- 8 oz cream cheese, softened
- 1/3 cup granulated sugar
- 1 large egg
- 1/4 cup sour cream
- 1/2 tsp vanilla extract
Blackberry Swirl
- 1 cup fresh blackberries (or frozen, thawed)
- 2 tbsp sugar
- 1 tbsp lemon juice
- 1/2 tbsp cornstarch (to thicken)

3. Step-by-Step Instructions
Step 1: Prepare the Blackberry Sauce
- In a small saucepan, combine blackberries, sugar, and lemon juice over medium heat.
- Cook, stirring occasionally, until blackberries soften and release their juices (about 5 minutes).
- Mix cornstarch with 1 tbsp water to form a slurry, then add it to the blackberry mixture.
- Continue to cook until the sauce thickens, then remove from heat and let cool. Puree if desired, then set aside.
Step 2: Make the Graham Cracker Crust
- Preheat your oven to 325°F (163°C). Line a 12-cup muffin tin with cupcake liners.
- In a bowl, combine graham cracker crumbs, sugar, and melted butter. Mix until crumbs are fully coated.
- Spoon about 1 tbsp of the crumb mixture into each cupcake liner and press down firmly with the back of a spoon to create an even crust.
- Bake the crust for 5 minutes, then set aside to cool slightly.
Step 3: Prepare the Cheesecake Filling
- In a mixing bowl, beat cream cheese until smooth and creamy.
- Add sugar and mix until combined.
- Beat in the egg, sour cream, and vanilla extract until smooth.
Step 4: Assemble the Cupcakes
- Spoon the cheesecake filling evenly over each crust, filling about 3/4 of each cupcake liner.
- Drop small spoonfuls of the blackberry sauce onto each cheesecake.
- Use a toothpick to swirl the sauce gently through the cheesecake filling to create a marbled effect.
Step 5: Bake the Cupcakes
- Bake for 18-20 minutes or until the centers are set but still slightly jiggly.
- Remove from the oven and let the cupcakes cool in the pan for 10 minutes.
- Transfer to a wire rack to cool completely, then refrigerate for at least 2 hours before serving.
4. Tips for Perfect Blackberry Cheesecake Cupcakes
Cheesecake Tips
- Room Temperature Ingredients: Make sure the cream cheese and sour cream are at room temperature for a smooth, lump-free filling.
- Avoid Overmixing: Mix ingredients until just combined to avoid cracks in the cheesecake.
Blackberry Sauce
- Consistency: Add more cornstarch if you prefer a thicker sauce. The sauce should be slightly thick but spreadable.
- Strain for Smoothness: Strain the blackberry sauce through a fine-mesh sieve for a seedless, smooth sauce.
Baking Tips
- Watch for Jiggle: Bake just until the centers are set but still slightly jiggly to keep the cheesecake creamy.
- Cooling: Cool completely at room temperature, then chill in the fridge to set fully.

5. Variations and Customizations
Different Berry Options
- Raspberry Swirl: Use raspberries instead of blackberries for a tangy twist.
- Blueberry: Try fresh blueberries and a touch of lemon zest in the sauce for a blueberry cheesecake flavor.
Toppings
- Whipped Cream: Add a dollop of whipped cream on top for extra richness.
- Chocolate Drizzle: Drizzle melted dark or white chocolate over the top for added sweetness.
- Extra Berries: Garnish with fresh blackberries or a mix of berries for a vibrant finish.
Crust Options
- Chocolate Crust: Use chocolate cookie crumbs instead of graham crackers for a chocolatey crust.
- Vanilla Wafer Crust: Substitute vanilla wafers for a lighter flavor.
6. Storage and Make-Ahead Tips
Storing Leftovers
- Refrigeration: Store cheesecake cupcakes in an airtight container in the refrigerator for up to 4 days.
Freezing
- Freeze: Place cupcakes in an airtight container and freeze for up to 2 months. Thaw in the fridge before serving.
7. Serving Suggestions
Presentation Ideas
- Individual Wrappers: Serve each cupcake in its liner for easy handling at parties or gatherings.
- Plate with Sauce: Drizzle extra blackberry sauce on the plate before serving for a gourmet look.
Pairing Ideas
- Fresh Berries: Serve with a side of fresh berries for added color and flavor.
- Coffee or Tea: A warm cup of coffee or tea balances the richness of the cheesecake.

FAQs
- Can I use frozen blackberries? Yes, thaw them first and drain any excess liquid before using.
- How can I make these cupcakes gluten-free? Use gluten-free graham crackers for the crust to make the cupcakes gluten-free.
- Can I substitute Greek yogurt for sour cream? Yes, Greek yogurt works well as a substitute in the cheesecake filling.
- What if I don’t have cupcake liners? Grease the muffin tin well, though liners are recommended for easy removal.
- How do I prevent cracks in the cheesecake? Avoid overmixing the batter and bake just until the centers are set.
- Can I use other fruits in the sauce? Yes! Raspberries, blueberries, or strawberries all make great substitutions.
- How long do these need to chill? Chill for at least 2 hours to set fully, though overnight chilling is ideal for best texture.
- Can I double the recipe? Absolutely! This recipe can easily be doubled for larger gatherings.
- How do I remove seeds from the sauce? Strain the sauce through a fine mesh sieve to remove seeds for a smoother texture.
- What’s the best way to swirl the sauce? Use a toothpick or skewer to create gentle swirls without over-mixing.
Blackberry Cheesecake Cupcakes offer a mini-dessert experience with a delicious swirl of blackberry sauce and a creamy, rich cheesecake filling. Perfectly portable and irresistibly good, these treats are sure to be a hit. Enjoy! 🫐🍰